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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56528573_56528686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56528573 - 56528686

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATGCAA

5'SS Class:

major

3'SS Sequence:

TTTATCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCT

Flanking Amino Acid:

TTFANVEAKLGEPSEIDQRD

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

60.4

39.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.8

0.83

0.7

81.6

30.3

Minor 5ss

30.3

-2.3

3.2

35.3

42.4

Minor BPS

74.5

0.85

1.5

91.05

32.7

Associated Gene:

Gene:

WASHC4

Ensembl Gene ID:

ENSAPLG00000015019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015671

56502852 - 56543301

40450