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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56530478_56531059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56530478 - 56531059

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTACCTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CTATGCTTACCT

Flanking Amino Acid:

TLRDHWTMYKRLLKSVHHNP

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

36.6

Major BPS

0.62

1.4

85.7

34.9

Major PPT

78.4

0.64

0.9

72.1

37.7

Minor 5ss

39.4

-1.2

2.9

52.4

44.8

Minor BPS

56.6

0.29

2.1

76.34

46.1

Associated Gene:

Gene:

WASHC4

Ensembl Gene ID:

ENSAPLG00000015019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015671

56502852 - 56543301

40450