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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5653406_5653483_R

Intron Information:

Intron Rank:

146785

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5653406 - 5653483

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGCGCTTG

5'SS Class:

weak_major

3'SS Sequence:

AATTCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTTATTTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.5

0.15

1.1

50.9

42.7

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

77.6

0.62

0.9

70.7

Minor 5ss

43.1

-0.8

3.3

60.3

45.5

Minor BPS

64.4

0.53

1.4

80.95

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039832

5652885 - 5653720

836