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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56538759_56538920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56538759 - 56538920

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TACTATTTAATA

Flanking Amino Acid:

CCEIKKLKYEAETKFYNGLL

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

79.6

0.67

0.9

81.2

36.5

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

64.2

0.44

1.4

69.14

37.5

Associated Gene:

Gene:

WASHC4

Ensembl Gene ID:

ENSAPLG00000015019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015671

56502852 - 56543301

40450