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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56539176_56540044_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56539176 - 56540044

Intron Length:

869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTTCATA

5'SS Class:

weak_major

3'SS Sequence:

TTAATAATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

DFSLDPIALKLLPYEQSSLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.3

63.5

42.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.2

0.48

68.1

42.1

Minor 5ss

44.5

-0.6

2.6

58.2

45.9

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

WASHC4

Ensembl Gene ID:

ENSAPLG00000015019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015671

56502852 - 56543301

40450