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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56555896_56558216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56555896 - 56558216

Intron Length:

2321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TGTGAATTAACA

Flanking Amino Acid:

PDKNGQADPLALAAEKDGTP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

81.5

32.7

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

79.7

0.67

0.8

77.2

31.5

Minor 5ss

35.8

-1.6

3.3

40.8

45.4

Minor BPS

55.7

0.18

1.9

70.69

40.9

Associated Gene:

Gene:

ALDH1L2

Ensembl Gene ID:

ENSAPLG00000008126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008505

56549836 - 56581875

32040

ENSAPLT00000037656

56555754 - 56581875

26122