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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56558452_56560501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56558452 - 56560501

Intron Length:

2050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTACCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTTCTTTTACCT

Flanking Amino Acid:

PRHRGASAINWTLIQGDKKA

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

83.2

0.75

0.8

74.5

35.4

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

66.6

0.6

1.6

84.55

36.3

Associated Gene:

Gene:

ALDH1L2

Ensembl Gene ID:

ENSAPLG00000008126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037656

56555754 - 56581875

26122

ENSAPLT00000008505

56549836 - 56581875

32040