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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56563609_56565238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56563609 - 56565238

Intron Length:

1630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTACTTTTAAAT

Flanking Amino Acid:

PGAWATVDGQVVTFYGSSLL

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.6

0.69

0.8

78.4

35.1

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

60.3

0.4

1.4

72.2

38.1

Associated Gene:

Gene:

ALDH1L2

Ensembl Gene ID:

ENSAPLG00000008126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037656

56555754 - 56581875

26122

ENSAPLT00000008505

56549836 - 56581875

32040