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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56578053_56579320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56578053 - 56579320

Intron Length:

1268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

ATCCTCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

GATGCTTTATCC

Flanking Amino Acid:

VYGGKQVCRPGFFMEPTVFT

Intron Amino Acid Position:

803

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

65.7

0.39

71.3

30.3

Major PPT

71.2

0.48

0.9

69.7

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

55.6

0.16

1.7

64.02

41.6

Associated Gene:

Gene:

ALDH1L2

Ensembl Gene ID:

ENSAPLG00000008126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037656

56555754 - 56581875

26122

ENSAPLT00000008505

56549836 - 56581875

32040