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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56579427_56580577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56579427 - 56580577

Intron Length:

1151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTTCT

5'SS Class:

major

3'SS Sequence:

CTTTCTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

AGTAAATCAATT

Flanking Amino Acid:

PVMVISKFKNGDVDGVLRRA

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

72.5

39.7

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

81.8

0.72

0.7

76.4

25.8

Minor 5ss

41.3

-1

50.7

45.7

Minor BPS

45.1

-0.2

1.9

63.22

40.2

Associated Gene:

Gene:

ALDH1L2

Ensembl Gene ID:

ENSAPLG00000008126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037656

56555754 - 56581875

26122

ENSAPLT00000008505

56549836 - 56581875

32040