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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56580778_56581819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56580778 - 56581819

Intron Length:

1042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AACTGATTAATA

Flanking Amino Acid:

FKQSGFGKDLGEEALHEYLR

Intron Amino Acid Position:

905

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

74.4

0.55

68.3

42.2

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

49.1

-0

59.97

40.1

Associated Gene:

Gene:

ALDH1L2

Ensembl Gene ID:

ENSAPLG00000008126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037656

56555754 - 56581875

26122

ENSAPLT00000008505

56549836 - 56581875

32040