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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5669991_5671919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5669991 - 5671919

Intron Length:

1929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGTCA

5'SS Class:

major

3'SS Sequence:

TCTCTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTGAATATAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

63.9

36.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

86.2

0.81

0.8

83.9

31.1

Minor 5ss

37.2

-1.4

3.2

45.2

44.7

Minor BPS

49.9

-0

1.8

66.13

Associated Gene:

Gene:

PROSER2

Ensembl Gene ID:

ENSAPLG00000027360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019209

5666937 - 5686150

19214