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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56872320_56875482_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56872320 - 56875482

Intron Length:

3163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTCCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTTTCCCTGAAG

Flanking Amino Acid:

TIGIHPVCAEVFTTLSVTKR

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

80.9

32.8

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

0.65

0.9

80.5

25.4

Minor 5ss

41.8

-0.9

2.5

51.7

44.8

Minor BPS

60.9

0.2

1.9

73.04

39.2

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018233

56872257 - 56908501

36245

ENSAPLT00000007525

56872257 - 56896692

24436