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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56875618_56877707_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56875618 - 56877707

Intron Length:

2090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TCTTTGTTATTT

Flanking Amino Acid:

AKIICNIRDNERVIGFHVLG

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

78.6

0.64

0.9

77.7

35.8

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

50.3

0.09

2.3

74.56

43.3

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018233

56872257 - 56908501

36245

ENSAPLT00000007525

56872257 - 56896692

24436