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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56877804_56879201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56877804 - 56879201

Intron Length:

1398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTCATCG

Flanking Amino Acid:

IAKFGEENIEVYHSHFWPLE

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

34.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

75.7

0.58

65.7

44.5

Minor 5ss

33.3

-1.9

3.2

44.6

43.4

Minor BPS

59.5

0.16

1.9

71.23

41.9

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018233

56872257 - 56908501

36245

ENSAPLT00000007525

56872257 - 56896692

24436