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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56879310_56881368_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56879310 - 56881368

Intron Length:

2059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GAATACCACACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTGAATA

Flanking Amino Acid:

QRLYGGATTKCDYVNVPTTV

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.13

47.4

39.9

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

64.6

0.46

1.3

72.42

33.4

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018233

56872257 - 56908501

36245

ENSAPLT00000007525

56872257 - 56896692

24436