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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56881526_56883186_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56881526 - 56883186

Intron Length:

1661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

ATGCAAATCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTTGTTGATG

Flanking Amino Acid:

LDKVGVKINEKTGKIPVNDV

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

0.9

74.5

35.9

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

60.3

0.23

51.4

Minor 5ss

34.6

-1.8

2.9

40.8

39.3

Minor BPS

56.2

0.05

2.1

69.4

38.8

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018233

56872257 - 56908501

36245

ENSAPLT00000007525

56872257 - 56896692

24436