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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56883264_56884942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56883264 - 56884942

Intron Length:

1679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

TGCTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TTTTTAGGAAAT

Flanking Amino Acid:

NEVIEGEYNTVLLAIGRDAC

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

64.8

40.9

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

0.72

0.9

76.2

37.8

Minor 5ss

34.3

-1.8

3.1

52.6

43.7

Minor BPS

45.8

-0.2

2.3

75.13

41.1

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018233

56872257 - 56908501

36245

ENSAPLT00000007525

56872257 - 56896692

24436