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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56885036_56887394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56885036 - 56887394

Intron Length:

2359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCAAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

KFIREFVPIKVEQIEEGTPG

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

65.5

0.35

0.9

34.6

Minor 5ss

46.1

-0.4

3.2

63.6

48.1

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018233

56872257 - 56908501

36245

ENSAPLT00000007525

56872257 - 56896692

24436