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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56890761_56890876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56890761 - 56890876

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAATTTT

5'SS Class:

strong_major

3'SS Sequence:

GCCTTTCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

CCGATGTGAAAA

Flanking Amino Acid:

VTPTPLGNSWGLGGTCVNVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

81.2

33.8

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

78.5

0.64

0.8

76.2

32.4

Minor 5ss

-0.5

58.4

46.2

Minor BPS

38.6

-0.8

41.17

39.5

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018233

56872257 - 56908501

36245

ENSAPLT00000007525

56872257 - 56896692

24436