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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56890950_56893612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56890950 - 56893612

Intron Length:

2663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TCTTATTTAATT

Flanking Amino Acid:

GGSGGLAAAKEAAKYGKKVM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.2

35.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

86.6

0.82

0.8

81.1

35.9

Minor 5ss

35.6

-1.6

3.5

48.7

47.8

Minor BPS

72.5

0.78

1.4

84.41

36.8

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018233

56872257 - 56908501

36245

ENSAPLT00000007525

56872257 - 56896692

24436