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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56896045_56896596_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

56896045 - 56896596

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

CTTTATTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTGTCCTTTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.2

53.8

44.7

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

84.5

0.78

0.8

79.4

32.2

Minor 5ss

-1.9

3.4

48.4

47.2

Minor BPS

74.6

0.86

1.6

87.87

37.8

Associated Gene:

Gene:

TXNRD1

Ensembl Gene ID:

ENSAPLG00000007200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007525

56872257 - 56896692

24436