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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56952418_56953615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56952418 - 56953615

Intron Length:

1198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGAAAT

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAA

U12 Branch Point Sequence:

ACAAACTTAAGT

Flanking Amino Acid:

SLTTFNSKSEAAETAYIMPS

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

74.5

35.1

Major BPS

65.6

0.39

0.9

55.7

32.1

Major PPT

87.7

0.85

0.7

81.2

36.5

Minor 5ss

37.6

-1.4

2.8

49.3

46.6

Minor BPS

49.8

0.06

1.9

65.17

44.7

Associated Gene:

Gene:

HCFC2

Ensembl Gene ID:

ENSAPLG00000007046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007322

56946745 - 56964425

17681