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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56956060_56956474_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56956060 - 56956474

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTAGCC

5'SS Class:

major

3'SS Sequence:

GTTTACCTGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTGTTTACCT

Flanking Amino Acid:

APETSMLSSQGGSSLHQTPQ

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

60.4

39.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

59.5

0.21

1.2

60.2

40.5

Minor 5ss

30.4

-2.2

3.5

42.6

44.5

Minor BPS

64.1

0.52

87.23

Associated Gene:

Gene:

HCFC2

Ensembl Gene ID:

ENSAPLG00000007046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007322

56946745 - 56964425

17681