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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56961771_56962151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56961771 - 56962151

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TATTTCTCAGGA

Flanking Amino Acid:

RYSNDLYELQASRWLWKKVK

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

74.5

0.61

79.6

29.1

Major PPT

75.6

0.58

79.3

33.1

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

48.2

-0.1

64.47

41.9

Associated Gene:

Gene:

HCFC2

Ensembl Gene ID:

ENSAPLG00000007046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007322

56946745 - 56964425

17681