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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56973068_56975386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56973068 - 56975386

Intron Length:

2319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTACTCTTAAGC

Flanking Amino Acid:

IYLDDDIIVQGDIQELYETK

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

69.9

0.45

1.1

63.4

46.3

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

64.4

0.43

1.6

72.36

38.5

Associated Gene:

Gene:

GLT8D2

Ensembl Gene ID:

ENSAPLG00000006875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007155

56967669 - 56978947

11279