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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56998133_56998531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56998133 - 56998531

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTATTCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

GTTTCTTCTATT

Flanking Amino Acid:

AYQTGKDISTNYYASQKKTF

Intron Amino Acid Position:

675

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

81.6

33.2

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

84.8

0.78

0.8

76.9

Minor 5ss

55.3

0.18

2.7

73.8

36.4

Minor BPS

55.7

0.26

1.8

76.82

39.8

Associated Gene:

Gene:

HSP90B1

Ensembl Gene ID:

ENSAPLG00000014678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042395

56993290 - 57005470

12181

ENSAPLT00000015327

56996013 - 57005470

9458