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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56998669_56998940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56998669 - 56998940

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

GTTCCTTGAACT

Flanking Amino Acid:

WMKDKALKDKIEKAVLSQRL

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

81.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

89.4

0.89

0.6

84.1

24.1

Minor 5ss

31.5

-2.1

2.8

40.7

45.1

Minor BPS

69.4

0.69

1.4

83.55

36.7

Associated Gene:

Gene:

HSP90B1

Ensembl Gene ID:

ENSAPLG00000014678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042395

56993290 - 57005470

12181

ENSAPLT00000015327

56996013 - 57005470

9458