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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57000008_57000098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57000008 - 57000098

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CCTTCTTCAATT

Flanking Amino Acid:

PKYLNFVKGVVDSDDLPLNV

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

78.2

0.7

79.9

32.6

Major PPT

70.6

0.46

0.9

71.4

33.3

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

0.52

1.6

75.4

42.3

Associated Gene:

Gene:

HSP90B1

Ensembl Gene ID:

ENSAPLG00000014678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042395

56993290 - 57005470

12181

ENSAPLT00000015327

56996013 - 57005470

9458