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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57001078_57001760_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57001078 - 57001760

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTACATACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GTTTACATACCT

Flanking Amino Acid:

EEEKKPKTKKVEKTVWDWEL

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

67.1

0.39

0.9

59.7

40.9

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

52.7

0.16

2.1

79.1

42.3

Associated Gene:

Gene:

HSP90B1

Ensembl Gene ID:

ENSAPLG00000014678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042395

56993290 - 57005470

12181

ENSAPLT00000015327

56996013 - 57005470

9458