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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57003902_57004039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57003902 - 57004039

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TCAGACTTAATC

Flanking Amino Acid:

GNEELTVKIKCDKEKNMLHV

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

81.6

0.78

0.8

24.9

Major PPT

88.9

0.88

0.6

88.5

21.1

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

58.2

0.24

1.6

63.88

41.9

Associated Gene:

Gene:

HSP90B1

Ensembl Gene ID:

ENSAPLG00000014678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042395

56993290 - 57005470

12181

ENSAPLT00000015327

56996013 - 57005470

9458