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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57004157_57004235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57004157 - 57004235

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GATTCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TGTTCTTGAATT

Flanking Amino Acid:

IINSLYKNKEIFLRELISNA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

1.1

Major BPS

74.6

0.61

65.6

41.4

Major PPT

77.1

0.61

73.3

41.6

Minor 5ss

33.4

-1.9

2.4

38.7

Minor BPS

0.8

1.3

85.63

34.4

Associated Gene:

Gene:

HSP90B1

Ensembl Gene ID:

ENSAPLG00000014678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042395

56993290 - 57005470

12181

ENSAPLT00000015327

56996013 - 57005470

9458