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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57004378_57005037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57004378 - 57005037

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

ATTATTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATTC

Flanking Amino Acid:

GSRTDDEVVQREEEAIQLDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.1

73.9

42.7

Major BPS

100

1.24

0.5

100

Major PPT

83.7

0.76

0.8

77.1

36.4

Minor 5ss

31.5

-2.1

2.4

34.7

Minor BPS

65.1

0.45

1.8

79.59

35.6

Associated Gene:

Gene:

HSP90B1

Ensembl Gene ID:

ENSAPLG00000014678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042395

56993290 - 57005470

12181

ENSAPLT00000015327

56996013 - 57005470

9458