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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57215627_57216928_F

Intron Information:

Intron Rank:

123571

Intron Class:

major

Intron Phase:

Intron Coordinates:

57215627 - 57216928

Intron Length:

1302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

CTAAGTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

72.5

0.56

1.1

63.4

Major PPT

66.3

0.37

58.7

42.4

Minor 5ss

35.3

-1.7

3.1

46.4

Minor BPS

45.4

-0.2

60.71

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042169

57215318 - 57217798

2481