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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57226834_57239114_F

Intron Information:

Intron Rank:

123568

Intron Class:

major

Intron Phase:

Intron Coordinates:

57226834 - 57239114

Intron Length:

12281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

ATATATGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

68.5

0.46

73.3

28.9

Major PPT

82.1

0.72

0.7

24.2

Minor 5ss

40.4

-1.1

3.3

55.6

48.6

Minor BPS

43.5

-0.4

2.2

63.75

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020952

57221706 - 57245146

23441