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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57233171_57239114_F

Intron Information:

Intron Rank:

123564

Intron Class:

major

Intron Phase:

Intron Coordinates:

57233171 - 57239114

Intron Length:

5944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

ATATATGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

68.5

0.46

73.3

28.9

Major PPT

82.1

0.72

0.7

24.2

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

43.5

-0.4

2.2

63.75

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018139

57233097 - 57261284

28188