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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57239229_57261259_F

Intron Information:

Intron Rank:

123565

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57239229 - 57261259

Intron Length:

22031

Sequence Information:

Terminal Dinucleotides:

GT-AT

5'SS Sequence:

CAG|GTACAGAGA

5'SS Class:

major

3'SS Sequence:

GCCTTTTTTTTAT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

TTTGACTGACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

63.1

42.9

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

44.6

-0.3

3.2

72.5

37.7

Minor 5ss

29.9

-2.3

3.3

40.1

45.6

Minor BPS

46.5

-0.1

2.1

71.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018139

57233097 - 57261284

28188