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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57338396_57380560_F

Intron Information:

Intron Rank:

126642

Intron Class:

major

Intron Phase:

Intron Coordinates:

57338396 - 57380560

Intron Length:

42165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCAACCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

73.4

0.53

0.9

66.2

34.5

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

72.3

0.68

1.4

31.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033140

57315443 - 57382351

66909