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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57416491_57418637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57416491 - 57418637

Intron Length:

2147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGAAAC

5'SS Class:

major

3'SS Sequence:

TGTTTCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

TGCACTTACACA

Flanking Amino Acid:

YGAELDADHPGFKDPVYRAR

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

68.4

36.5

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

83.5

0.75

0.7

82.1

Minor 5ss

36.7

-1.5

3.1

53.9

43.1

Minor BPS

45.2

-0.3

2.1

56.06

43.4

Associated Gene:

Gene:

PAH

Ensembl Gene ID:

ENSAPLG00000011061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011541

57397386 - 57432791

35406