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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57457262_57458961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57457262 - 57458961

Intron Length:

1700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTACTTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAC

U12 Branch Point Sequence:

GCTTGCTTACTT

Flanking Amino Acid:

ANKEFAQFSQDIGLASLGSS

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

70.5

0.51

33.1

Major PPT

75.6

0.58

0.9

36.5

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

53.2

0.18

2.1

71.98

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011189

57438430 - 57468940

30511