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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5749659_5749944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5749659 - 5749944

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGTTCA

5'SS Class:

major

3'SS Sequence:

TTTGATTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TTTTCTTTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.1

62.9

38.4

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

83.3

0.75

0.8

77.6

36.5

Minor 5ss

41.6

-0.9

55.5

42.8

Minor BPS

83.7

1.14

0.9

94.68

Associated Gene:

Gene:

UPF2

Ensembl Gene ID:

ENSAPLG00000010287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039255

5694207 - 5750136

55930

ENSAPLT00000020497

5694207 - 5750136

55930