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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57582622_57584230_F

Intron Information:

Intron Rank:

139301

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57582622 - 57584230

Intron Length:

1609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCAAGATTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TATTCTTTCAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

59.3

0.21

1.1

50.6

46.9

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

55.7

0.03

1.9

65.66

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036321

57581675 - 57584389

2715