Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_57604935_57640229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57604935 - 57640229

Intron Length:

35295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

GTGTTTTGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

GTGTTTTGAATA

Flanking Amino Acid:

FVCGDRGFYFSKPTGYGSSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

68.2

38.6

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.34

1.1

62.2

43.3

Minor 5ss

35.7

-1.6

2.9

46.8

42.6

Minor BPS

57.8

0.24

1.4

64.1

36.7

Associated Gene:

Gene:

IGF1

Ensembl Gene ID:

ENSAPLG00000010676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011130

57600238 - 57650955

50718