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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5762925_5764725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5762925 - 5764725

Intron Length:

1801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTTGT

5'SS Class:

major

3'SS Sequence:

CTGTTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

CTGTTTTTAACA

Flanking Amino Acid:

HLCKLMLESQEFDRFLATKF

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

69.9

43.4

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

0.68

0.9

76.7

36.2

Minor 5ss

46.4

-0.4

2.9

67.9

42.9

Minor BPS

72.6

0.7

1.2

74.03

38.5

Associated Gene:

Gene:

DHTKD1

Ensembl Gene ID:

ENSAPLG00000010342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042355

5759577 - 5778772

19196

ENSAPLT00000010787

5759577 - 5777116

17540