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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5764921_5765244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5764921 - 5765244

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCATGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

GTTTTTTCCATG

Flanking Amino Acid:

LTGLLQLPPELMFRKMRGLS

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

29.9

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

86.4

0.82

0.8

82.2

28.6

Minor 5ss

33.8

-1.8

3.5

47.5

42.5

Minor BPS

46.1

-0.4

1.9

55.29

40.9

Associated Gene:

Gene:

DHTKD1

Ensembl Gene ID:

ENSAPLG00000010342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042355

5759577 - 5778772

19196

ENSAPLT00000010787

5759577 - 5777116

17540