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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5768125_5768978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5768125 - 5768978

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCACCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

ATTCCCTCACCC

Flanking Amino Acid:

FTNPSMYKIIRSRKSIPDTY

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.7

37.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

68.3

0.41

0.8

60.9

28.1

Minor 5ss

34.3

-1.8

3.4

48.3

Minor BPS

56.6

0.19

1.9

70.94

39.9

Associated Gene:

Gene:

DHTKD1

Ensembl Gene ID:

ENSAPLG00000010342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042355

5759577 - 5778772

19196

ENSAPLT00000010787

5759577 - 5777116

17540