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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5769043_5769138_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5769043 - 5769138

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGAAGTG

5'SS Class:

weak_major

3'SS Sequence:

TACCAACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

TCCTACCAACCT

Flanking Amino Acid:

HLVAAGLMTEAHWKGLVEPS

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.2

55.3

42.2

Major BPS

61.6

0.29

1.4

63.4

Major PPT

67.6

0.4

0.9

59.2

36.5

Minor 5ss

28.4

-2.5

3.5

38.3

46.8

Minor BPS

41.4

-0.5

2.3

60.96

48.3

Associated Gene:

Gene:

DHTKD1

Ensembl Gene ID:

ENSAPLG00000010342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010787

5759577 - 5777116

17540