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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57699655_57700327_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57699655 - 57700327

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTATATGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTGATA

Flanking Amino Acid:

EHPAPKQHLQEGMNSYLDTP

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.4

0.53

69.3

40.3

Minor 5ss

-1

59.7

44.8

Minor BPS

62.9

0.4

1.1

66.93

33.7

Associated Gene:

Gene:

PARPBP

Ensembl Gene ID:

ENSAPLG00000010548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010998

57699320 - 57749390

50071