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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5770379_5771006_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5770379 - 5771006

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

ATTGCTTGGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTTTGCTTATTG

Flanking Amino Acid:

TLAFGSLLCQGFNVRLSGQD

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

52.9

0.07

1.2

52.8

45.7

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

58.8

0.14

2.1

70.91

42.8

Associated Gene:

Gene:

DHTKD1

Ensembl Gene ID:

ENSAPLG00000010342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010787

5759577 - 5777116

17540

ENSAPLT00000042355

5759577 - 5778772

19196