Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_57831893_57840733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57831893 - 57840733

Intron Length:

8841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAACTTTTAATT

Flanking Amino Acid:

GHVEPLVPYISDTGTKPPES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.7

0.71

0.8

80.5

31.5

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

66.4

0.59

1.2

35.6

Associated Gene:

Gene:

DRAM1

Ensembl Gene ID:

ENSAPLG00000016221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016924

57820734 - 57840908

20175